Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Mrpl40Q9Z2Q5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.57■□□□□ 0.4
Mrpl40Q9Z2Q5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mrpl40Q9Z2Q5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.57■□□□□ 0.4
Mrpl40Q9Z2Q5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mrpl40Q9Z2Q5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mrpl40Q9Z2Q5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.57■□□□□ 0.4
Mrpl40Q9Z2Q5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mrpl40Q9Z2Q5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.57■□□□□ 0.4
Mrpl40Q9Z2Q5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mrpl40Q9Z2Q5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mrpl40Q9Z2Q5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Gm22325-201ENSMUST00000158904 308 ntBASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl40Q9Z2Q5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl40Q9Z2Q5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Mtag2-201ENSMUST00000058665 714 ntBASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.54■□□□□ 0.4
Mrpl40Q9Z2Q5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl40Q9Z2Q5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms