Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hmg20bQ9Z104 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmg20bQ9Z104 Gm5643-201ENSMUST00000117081 966 ntBASIC20.75■□□□□ 0.91
Hmg20bQ9Z104 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.75■□□□□ 0.91
Hmg20bQ9Z104 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.75■□□□□ 0.91
Hmg20bQ9Z104 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.75■□□□□ 0.91
Hmg20bQ9Z104 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hmg20bQ9Z104 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Hmg20bQ9Z104 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmg20bQ9Z104 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.75■□□□□ 0.91
Hmg20bQ9Z104 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmg20bQ9Z104 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Hmg20bQ9Z104 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmg20bQ9Z104 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.74■□□□□ 0.91
Hmg20bQ9Z104 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmg20bQ9Z104 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmg20bQ9Z104 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmg20bQ9Z104 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmg20bQ9Z104 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.74■□□□□ 0.91
Hmg20bQ9Z104 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmg20bQ9Z104 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Hmg20bQ9Z104 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Gm37292-201ENSMUST00000192062 758 ntBASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20bQ9Z104 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20bQ9Z104 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20bQ9Z104 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20bQ9Z104 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20bQ9Z104 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20bQ9Z104 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20bQ9Z104 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20bQ9Z104 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20bQ9Z104 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20bQ9Z104 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.72■□□□□ 0.91
Hmg20bQ9Z104 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20bQ9Z104 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20bQ9Z104 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20bQ9Z104 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmg20bQ9Z104 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Hmg20bQ9Z104 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Gm12382-201ENSMUST00000122005 922 ntBASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Gm10653-202ENSMUST00000139570 835 ntBASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Gm20760-201ENSMUST00000179197 648 ntBASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Hmg20bQ9Z104 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmg20bQ9Z104 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Hmg20bQ9Z104 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmg20bQ9Z104 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmg20bQ9Z104 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmg20bQ9Z104 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Hmg20bQ9Z104 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hmg20bQ9Z104 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms