Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClcnkaQ9WUB7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 Gm12527-201ENSMUST00000117967 564 ntBASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClcnkaQ9WUB7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ClcnkaQ9WUB7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ClcnkaQ9WUB7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Gm37856-201ENSMUST00000191634 999 ntBASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ClcnkaQ9WUB7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClcnkaQ9WUB7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ClcnkaQ9WUB7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
ClcnkaQ9WUB7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClcnkaQ9WUB7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ClcnkaQ9WUB7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ClcnkaQ9WUB7 Trmt13-210ENSMUST00000198454 880 ntBASIC16.13■□□□□ 0.17
ClcnkaQ9WUB7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.13■□□□□ 0.17
ClcnkaQ9WUB7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.13■□□□□ 0.17
ClcnkaQ9WUB7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.13■□□□□ 0.17
ClcnkaQ9WUB7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClcnkaQ9WUB7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClcnkaQ9WUB7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClcnkaQ9WUB7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms