Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col13a1Q9R1N9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Gm2274-201ENSMUST00000184539 609 ntBASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Gm27704-201ENSMUST00000185094 107 ntBASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col13a1Q9R1N9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col13a1Q9R1N9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col13a1Q9R1N9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms