Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.92■□□□□ 0.46
Msh5Q9QUM7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh5Q9QUM7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh5Q9QUM7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh5Q9QUM7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh5Q9QUM7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh5Q9QUM7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Idnk-204ENSMUST00000226010 1898 ntBASIC17.91■□□□□ 0.46
Msh5Q9QUM7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Gm28196-201ENSMUST00000187719 640 ntBASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.91■□□□□ 0.46
Msh5Q9QUM7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh5Q9QUM7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 AC154532.1-201ENSMUST00000227860 965 ntBASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh5Q9QUM7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Msh5Q9QUM7 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.89■□□□□ 0.46
Msh5Q9QUM7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.89■□□□□ 0.46
Msh5Q9QUM7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Msh5Q9QUM7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Gm26524-201ENSMUST00000192339 390 ntBASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Rab3c-203ENSMUST00000224180 967 ntBASIC17.88■□□□□ 0.45
Msh5Q9QUM7 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.88■□□□□ 0.45
Msh5Q9QUM7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh5Q9QUM7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms