Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3aQ9JKX8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3aQ9JKX8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 Gm715-201ENSMUST00000117865 831 ntBASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk3aQ9JKX8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Gm24841-201ENSMUST00000158676 357 ntBASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk3aQ9JKX8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.89■□□□□ 0.3
Upk3aQ9JKX8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Upk3aQ9JKX8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk3aQ9JKX8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk3aQ9JKX8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk3aQ9JKX8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk3aQ9JKX8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Upk3aQ9JKX8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.88■□□□□ 0.29
Upk3aQ9JKX8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk3aQ9JKX8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk3aQ9JKX8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Upk3aQ9JKX8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Upk3aQ9JKX8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upk3aQ9JKX8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms