Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.42■□□□□ 0.22
Trim39Q9ESN2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim39Q9ESN2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim39Q9ESN2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim39Q9ESN2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim39Q9ESN2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim39Q9ESN2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim39Q9ESN2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim39Q9ESN2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim39Q9ESN2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim39Q9ESN2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Gm37179-201ENSMUST00000194862 823 ntBASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim39Q9ESN2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Gm7290-201ENSMUST00000104990 617 ntBASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Gm12918-201ENSMUST00000120234 636 ntBASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Gm15710-201ENSMUST00000121821 636 ntBASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Gm5075-201ENSMUST00000196916 622 ntBASIC16.4■□□□□ 0.22
Trim39Q9ESN2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim39Q9ESN2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Gm6211-202ENSMUST00000167849 925 ntBASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Trim39Q9ESN2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.38■□□□□ 0.21
Trim39Q9ESN2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim39Q9ESN2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms