Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Vps35Q9EQH3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.58■□□□□ 0.4
Vps35Q9EQH3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Vps35Q9EQH3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps35Q9EQH3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.58■□□□□ 0.4
Vps35Q9EQH3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.58■□□□□ 0.4
Vps35Q9EQH3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps35Q9EQH3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps35Q9EQH3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps35Q9EQH3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps35Q9EQH3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.58■□□□□ 0.4
Vps35Q9EQH3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps35Q9EQH3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps35Q9EQH3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps35Q9EQH3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Gm15378-201ENSMUST00000121894 207 ntBASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps35Q9EQH3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps35Q9EQH3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps35Q9EQH3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps35Q9EQH3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps35Q9EQH3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps35Q9EQH3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps35Q9EQH3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps35Q9EQH3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps35Q9EQH3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps35Q9EQH3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps35Q9EQH3 Gm10698-201ENSMUST00000182663 604 ntBASIC17.56■□□□□ 0.4
Vps35Q9EQH3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Vps35Q9EQH3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.56■□□□□ 0.4
Vps35Q9EQH3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps35Q9EQH3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps35Q9EQH3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps35Q9EQH3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps35Q9EQH3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Vps35Q9EQH3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps35Q9EQH3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps35Q9EQH3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.55■□□□□ 0.4
Vps35Q9EQH3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps35Q9EQH3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps35Q9EQH3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps35Q9EQH3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.55■□□□□ 0.4
Vps35Q9EQH3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vps35Q9EQH3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps35Q9EQH3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.54■□□□□ 0.4
Vps35Q9EQH3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Gm18025-201ENSMUST00000221733 862 ntBASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vps35Q9EQH3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps35Q9EQH3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps35Q9EQH3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps35Q9EQH3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vps35Q9EQH3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps35Q9EQH3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.53■□□□□ 0.4
Vps35Q9EQH3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.53■□□□□ 0.4
Vps35Q9EQH3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps35Q9EQH3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Vps35Q9EQH3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.53■□□□□ 0.4
Vps35Q9EQH3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps35Q9EQH3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.52■□□□□ 0.4
Vps35Q9EQH3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Vps35Q9EQH3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.52■□□□□ 0.4
Vps35Q9EQH3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms