Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Gm2559-201ENSMUST00000201323 363 ntBASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne8Q9DC53 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne8Q9DC53 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne8Q9DC53 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cpne8Q9DC53 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.35■□□□□ 0.53
Cpne8Q9DC53 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cpne8Q9DC53 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne8Q9DC53 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cpne8Q9DC53 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.35■□□□□ 0.53
Cpne8Q9DC53 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.35■□□□□ 0.53
Cpne8Q9DC53 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne8Q9DC53 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne8Q9DC53 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Cpne8Q9DC53 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne8Q9DC53 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne8Q9DC53 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpne8Q9DC53 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpne8Q9DC53 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpne8Q9DC53 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cpne8Q9DC53 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Cpne8Q9DC53 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.33■□□□□ 0.52
Cpne8Q9DC53 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpne8Q9DC53 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.33■□□□□ 0.52
Cpne8Q9DC53 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpne8Q9DC53 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpne8Q9DC53 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpne8Q9DC53 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cpne8Q9DC53 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne8Q9DC53 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne8Q9DC53 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms