Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ccdc7Q9D541 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc7Q9D541 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc7Q9D541 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc7Q9D541 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc7Q9D541 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.59■□□□□ 0.89
Ccdc7Q9D541 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc7Q9D541 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc7Q9D541 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc7Q9D541 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ccdc7Q9D541 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.58■□□□□ 0.89
Ccdc7Q9D541 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc7Q9D541 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc7Q9D541 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.58■□□□□ 0.89
Ccdc7Q9D541 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc7Q9D541 Gm4968-201ENSMUST00000071458 858 ntBASIC20.58■□□□□ 0.89
Ccdc7Q9D541 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc7Q9D541 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc7Q9D541 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ccdc7Q9D541 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc7Q9D541 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc7Q9D541 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ccdc7Q9D541 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Gm2559-201ENSMUST00000201323 363 ntBASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7Q9D541 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.56■□□□□ 0.88
Ccdc7Q9D541 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7Q9D541 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Gm5408-201ENSMUST00000197998 747 ntBASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.55■□□□□ 0.88
Ccdc7Q9D541 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc7Q9D541 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc7Q9D541 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc7Q9D541 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc7Q9D541 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc7Q9D541 Gm15375-201ENSMUST00000119510 849 ntBASIC20.54■□□□□ 0.88
Ccdc7Q9D541 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.54■□□□□ 0.88
Ccdc7Q9D541 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc7Q9D541 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc7Q9D541 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc7Q9D541 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.54■□□□□ 0.88
Ccdc7Q9D541 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc7Q9D541 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc7Q9D541 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.53■□□□□ 0.88
Ccdc7Q9D541 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.53■□□□□ 0.88
Ccdc7Q9D541 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc7Q9D541 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.53■□□□□ 0.88
Ccdc7Q9D541 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc7Q9D541 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc7Q9D541 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc7Q9D541 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.53■□□□□ 0.88
Ccdc7Q9D541 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc7Q9D541 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc7Q9D541 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc7Q9D541 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc7Q9D541 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms