Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.68■□□□□ 0.58
Gm3404Q9D506 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Gm3404Q9D506 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3404Q9D506 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gm3404Q9D506 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3404Q9D506 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3404Q9D506 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.67■□□□□ 0.58
Gm3404Q9D506 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3404Q9D506 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.67■□□□□ 0.58
Gm3404Q9D506 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3404Q9D506 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3404Q9D506 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3404Q9D506 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3404Q9D506 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3404Q9D506 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3404Q9D506 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Gm3404Q9D506 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Gm3404Q9D506 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3404Q9D506 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3404Q9D506 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3404Q9D506 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.66■□□□□ 0.58
Gm3404Q9D506 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3404Q9D506 Gm43183-201ENSMUST00000200632 547 ntBASIC18.66■□□□□ 0.58
Gm3404Q9D506 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.66■□□□□ 0.58
Gm3404Q9D506 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3404Q9D506 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3404Q9D506 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3404Q9D506 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3404Q9D506 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3404Q9D506 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3404Q9D506 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3404Q9D506 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3404Q9D506 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3404Q9D506 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3404Q9D506 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3404Q9D506 Idnk-204ENSMUST00000226010 1898 ntBASIC18.65■□□□□ 0.58
Gm3404Q9D506 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3404Q9D506 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3404Q9D506 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3404Q9D506 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3404Q9D506 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
Gm3404Q9D506 Gm12382-201ENSMUST00000122005 922 ntBASIC18.65■□□□□ 0.58
Gm3404Q9D506 Gm29791-202ENSMUST00000207888 369 ntBASIC18.65■□□□□ 0.58
Gm3404Q9D506 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3404Q9D506 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3404Q9D506 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3404Q9D506 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.65■□□□□ 0.58
Gm3404Q9D506 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Gm3404Q9D506 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3404Q9D506 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3404Q9D506 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3404Q9D506 Rarb-207ENSMUST00000225921 2756 ntBASIC18.64■□□□□ 0.57
Gm3404Q9D506 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3404Q9D506 Gm37292-201ENSMUST00000192062 758 ntBASIC18.64■□□□□ 0.57
Gm3404Q9D506 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Gm3404Q9D506 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3404Q9D506 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Gm3404Q9D506 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3404Q9D506 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Gm3404Q9D506 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3404Q9D506 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.63■□□□□ 0.57
Gm3404Q9D506 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
Gm3404Q9D506 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.63■□□□□ 0.57
Gm3404Q9D506 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3404Q9D506 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms