Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shmt2Q9CZN7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shmt2Q9CZN7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shmt2Q9CZN7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shmt2Q9CZN7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Shmt2Q9CZN7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Shmt2Q9CZN7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shmt2Q9CZN7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Shmt2Q9CZN7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Shmt2Q9CZN7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.77■□□□□ 0.28
Shmt2Q9CZN7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.77■□□□□ 0.28
Shmt2Q9CZN7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.77■□□□□ 0.28
Shmt2Q9CZN7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Shmt2Q9CZN7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Shmt2Q9CZN7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Shmt2Q9CZN7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.77■□□□□ 0.28
Shmt2Q9CZN7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shmt2Q9CZN7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Shmt2Q9CZN7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Shmt2Q9CZN7 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.77■□□□□ 0.27
Shmt2Q9CZN7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Shmt2Q9CZN7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Gm2559-201ENSMUST00000201323 363 ntBASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shmt2Q9CZN7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shmt2Q9CZN7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shmt2Q9CZN7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shmt2Q9CZN7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Shmt2Q9CZN7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shmt2Q9CZN7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shmt2Q9CZN7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shmt2Q9CZN7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shmt2Q9CZN7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shmt2Q9CZN7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shmt2Q9CZN7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shmt2Q9CZN7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shmt2Q9CZN7 Gm2399-201ENSMUST00000104944 225 ntBASIC16.75■□□□□ 0.27
Shmt2Q9CZN7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms