Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.05■□□□□ 0.64
Ssr1Q9CY50 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Gm26571-201ENSMUST00000181399 666 ntBASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssr1Q9CY50 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.04■□□□□ 0.64
Ssr1Q9CY50 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssr1Q9CY50 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssr1Q9CY50 Gm18284-201ENSMUST00000172604 624 ntBASIC19.04■□□□□ 0.64
Ssr1Q9CY50 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssr1Q9CY50 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssr1Q9CY50 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ssr1Q9CY50 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssr1Q9CY50 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssr1Q9CY50 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssr1Q9CY50 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssr1Q9CY50 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Ssr1Q9CY50 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.03■□□□□ 0.64
Ssr1Q9CY50 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssr1Q9CY50 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.03■□□□□ 0.64
Ssr1Q9CY50 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssr1Q9CY50 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssr1Q9CY50 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssr1Q9CY50 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssr1Q9CY50 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ssr1Q9CY50 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
Ssr1Q9CY50 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssr1Q9CY50 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssr1Q9CY50 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssr1Q9CY50 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssr1Q9CY50 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssr1Q9CY50 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ssr1Q9CY50 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssr1Q9CY50 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssr1Q9CY50 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssr1Q9CY50 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssr1Q9CY50 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ssr1Q9CY50 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ssr1Q9CY50 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssr1Q9CY50 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ssr1Q9CY50 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssr1Q9CY50 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19■□□□□ 0.63
Ssr1Q9CY50 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ssr1Q9CY50 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Ssr1Q9CY50 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ssr1Q9CY50 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssr1Q9CY50 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ssr1Q9CY50 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssr1Q9CY50 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19■□□□□ 0.63
Ssr1Q9CY50 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ssr1Q9CY50 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssr1Q9CY50 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssr1Q9CY50 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssr1Q9CY50 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ssr1Q9CY50 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssr1Q9CY50 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssr1Q9CY50 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ssr1Q9CY50 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ssr1Q9CY50 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssr1Q9CY50 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ssr1Q9CY50 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms