Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.91■□□□□ 0.78
Chd1lQ9CXF7 Gm6139-201ENSMUST00000079261 882 ntBASIC19.91■□□□□ 0.78
Chd1lQ9CXF7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1lQ9CXF7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1lQ9CXF7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.91■□□□□ 0.78
Chd1lQ9CXF7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1lQ9CXF7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1lQ9CXF7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Chd1lQ9CXF7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1lQ9CXF7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Chd1lQ9CXF7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Chd1lQ9CXF7 Dancr-204ENSMUST00000132389 2347 ntBASIC19.91■□□□□ 0.78
Chd1lQ9CXF7 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.91■□□□□ 0.78
Chd1lQ9CXF7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Chd1lQ9CXF7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1lQ9CXF7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chd1lQ9CXF7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Chd1lQ9CXF7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chd1lQ9CXF7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chd1lQ9CXF7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1lQ9CXF7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1lQ9CXF7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1lQ9CXF7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1lQ9CXF7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1lQ9CXF7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1lQ9CXF7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Chd1lQ9CXF7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.88■□□□□ 0.77
Chd1lQ9CXF7 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.88■□□□□ 0.77
Chd1lQ9CXF7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.88■□□□□ 0.77
Chd1lQ9CXF7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1lQ9CXF7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1lQ9CXF7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.87■□□□□ 0.77
Chd1lQ9CXF7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.87■□□□□ 0.77
Chd1lQ9CXF7 Reep4-203ENSMUST00000226563 1444 ntBASIC19.87■□□□□ 0.77
Chd1lQ9CXF7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Chd1lQ9CXF7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1lQ9CXF7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1lQ9CXF7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1lQ9CXF7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1lQ9CXF7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1lQ9CXF7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1lQ9CXF7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Chd1lQ9CXF7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms