Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.66■□□□□ 0.42
Retreg3Q9CQV4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retreg3Q9CQV4 Gm19087-201ENSMUST00000191430 946 ntBASIC17.66■□□□□ 0.42
Retreg3Q9CQV4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retreg3Q9CQV4 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retreg3Q9CQV4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retreg3Q9CQV4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retreg3Q9CQV4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retreg3Q9CQV4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retreg3Q9CQV4 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC17.66■□□□□ 0.42
Retreg3Q9CQV4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retreg3Q9CQV4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retreg3Q9CQV4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retreg3Q9CQV4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retreg3Q9CQV4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retreg3Q9CQV4 Gm15378-201ENSMUST00000121894 207 ntBASIC17.65■□□□□ 0.42
Retreg3Q9CQV4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retreg3Q9CQV4 Mir8112-201ENSMUST00000184382 131 ntBASIC17.65■□□□□ 0.42
Retreg3Q9CQV4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retreg3Q9CQV4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retreg3Q9CQV4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retreg3Q9CQV4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Retreg3Q9CQV4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.65■□□□□ 0.42
Retreg3Q9CQV4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.64■□□□□ 0.42
Retreg3Q9CQV4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retreg3Q9CQV4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Retreg3Q9CQV4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retreg3Q9CQV4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retreg3Q9CQV4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retreg3Q9CQV4 Gm715-201ENSMUST00000117865 831 ntBASIC17.64■□□□□ 0.41
Retreg3Q9CQV4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.64■□□□□ 0.41
Retreg3Q9CQV4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Retreg3Q9CQV4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retreg3Q9CQV4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retreg3Q9CQV4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retreg3Q9CQV4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retreg3Q9CQV4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retreg3Q9CQV4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retreg3Q9CQV4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retreg3Q9CQV4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retreg3Q9CQV4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retreg3Q9CQV4 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.63■□□□□ 0.41
Retreg3Q9CQV4 Gm10418-201ENSMUST00000100943 576 ntBASIC17.63■□□□□ 0.41
Retreg3Q9CQV4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retreg3Q9CQV4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retreg3Q9CQV4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg3Q9CQV4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg3Q9CQV4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.6■□□□□ 0.41
Retreg3Q9CQV4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg3Q9CQV4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Retreg3Q9CQV4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg3Q9CQV4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms