Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Gm13401-201ENSMUST00000117074 291 ntBASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm7Q9CQQ8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm7Q9CQQ8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm7Q9CQQ8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm7Q9CQQ8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.77■□□□□ 0.44
Lsm7Q9CQQ8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.77■□□□□ 0.44
Lsm7Q9CQQ8 Gm6433-201ENSMUST00000118634 875 ntBASIC17.77■□□□□ 0.44
Lsm7Q9CQQ8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm7Q9CQQ8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Lsm7Q9CQQ8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm7Q9CQQ8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm7Q9CQQ8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm7Q9CQQ8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm7Q9CQQ8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm7Q9CQQ8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lsm7Q9CQQ8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lsm7Q9CQQ8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Lsm7Q9CQQ8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lsm7Q9CQQ8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Gm27463-201ENSMUST00000183569 57 ntBASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Gm9987-201ENSMUST00000069768 567 ntBASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Fst-202ENSMUST00000223640 2612 ntBASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lsm7Q9CQQ8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Gm38027-201ENSMUST00000192315 235 ntBASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm7Q9CQQ8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm7Q9CQQ8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms