Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col25a1Q99MQ5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Col25a1Q99MQ5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col25a1Q99MQ5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col25a1Q99MQ5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.21■□□□□ 0.51
Col25a1Q99MQ5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.21■□□□□ 0.51
Col25a1Q99MQ5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.21■□□□□ 0.51
Col25a1Q99MQ5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col25a1Q99MQ5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Col25a1Q99MQ5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.21■□□□□ 0.51
Col25a1Q99MQ5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.21■□□□□ 0.51
Col25a1Q99MQ5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col25a1Q99MQ5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col25a1Q99MQ5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.21■□□□□ 0.51
Col25a1Q99MQ5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Col25a1Q99MQ5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col25a1Q99MQ5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col25a1Q99MQ5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col25a1Q99MQ5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Col25a1Q99MQ5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Col25a1Q99MQ5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Col25a1Q99MQ5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col25a1Q99MQ5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col25a1Q99MQ5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.19■□□□□ 0.5
Col25a1Q99MQ5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Col25a1Q99MQ5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.19■□□□□ 0.5
Col25a1Q99MQ5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col25a1Q99MQ5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Col25a1Q99MQ5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col25a1Q99MQ5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col25a1Q99MQ5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 Gm10418-201ENSMUST00000100943 576 ntBASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 Gm23935-201ENSMUST00000102303 57 ntBASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 Gm24270-201ENSMUST00000102326 57 ntBASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 Gm24245-201ENSMUST00000157318 57 ntBASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 Mir6349-201ENSMUST00000184059 97 ntBASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 Mir1668-201ENSMUST00000184114 107 ntBASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Col25a1Q99MQ5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 Gm8097-201ENSMUST00000117903 829 ntBASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 Gm11355-201ENSMUST00000121120 306 ntBASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.17■□□□□ 0.5
Col25a1Q99MQ5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Gm10052-201ENSMUST00000168019 960 ntBASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Gm7729-201ENSMUST00000050143 801 ntBASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Gm10175-201ENSMUST00000086013 645 ntBASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col25a1Q99MQ5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms