Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Gm11643-201ENSMUST00000119578 864 ntBASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr3Q99MB1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Gm13836-201ENSMUST00000121159 501 ntBASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tlr3Q99MB1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr3Q99MB1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr3Q99MB1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr3Q99MB1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr3Q99MB1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr3Q99MB1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr3Q99MB1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.86■□□□□ 0.61
Tlr3Q99MB1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Tlr3Q99MB1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr3Q99MB1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr3Q99MB1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr3Q99MB1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Tlr3Q99MB1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr3Q99MB1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Gm13401-201ENSMUST00000117074 291 ntBASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr3Q99MB1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tlr3Q99MB1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tlr3Q99MB1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tlr3Q99MB1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tlr3Q99MB1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tlr3Q99MB1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms