Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nck1Q99M51 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Nck1Q99M51 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nck1Q99M51 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nck1Q99M51 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nck1Q99M51 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Nck1Q99M51 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Nck1Q99M51 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nck1Q99M51 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nck1Q99M51 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nck1Q99M51 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.78■□□□□ 0.28
Nck1Q99M51 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.78■□□□□ 0.28
Nck1Q99M51 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nck1Q99M51 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nck1Q99M51 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nck1Q99M51 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nck1Q99M51 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nck1Q99M51 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.78■□□□□ 0.28
Nck1Q99M51 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.78■□□□□ 0.28
Nck1Q99M51 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Nck1Q99M51 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.77■□□□□ 0.28
Nck1Q99M51 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nck1Q99M51 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.77■□□□□ 0.28
Nck1Q99M51 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Nck1Q99M51 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Nck1Q99M51 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nck1Q99M51 Gm13234-201ENSMUST00000120010 747 ntBASIC16.77■□□□□ 0.28
Nck1Q99M51 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nck1Q99M51 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nck1Q99M51 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nck1Q99M51 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nck1Q99M51 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.77■□□□□ 0.27
Nck1Q99M51 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nck1Q99M51 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nck1Q99M51 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nck1Q99M51 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nck1Q99M51 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nck1Q99M51 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nck1Q99M51 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nck1Q99M51 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nck1Q99M51 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nck1Q99M51 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.76■□□□□ 0.27
Nck1Q99M51 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nck1Q99M51 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nck1Q99M51 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nck1Q99M51 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.76■□□□□ 0.27
Nck1Q99M51 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nck1Q99M51 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nck1Q99M51 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nck1Q99M51 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nck1Q99M51 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nck1Q99M51 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nck1Q99M51 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nck1Q99M51 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nck1Q99M51 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nck1Q99M51 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nck1Q99M51 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nck1Q99M51 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.75■□□□□ 0.27
Nck1Q99M51 Nespas-201ENSMUST00000143738 1083 ntBASIC16.75■□□□□ 0.27
Nck1Q99M51 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Nck1Q99M51 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nck1Q99M51 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nck1Q99M51 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nck1Q99M51 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.75■□□□□ 0.27
Nck1Q99M51 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nck1Q99M51 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nck1Q99M51 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nck1Q99M51 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nck1Q99M51 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms