Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cstf1Q99LC2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cstf1Q99LC2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cstf1Q99LC2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cstf1Q99LC2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cstf1Q99LC2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cstf1Q99LC2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cstf1Q99LC2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cstf1Q99LC2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cstf1Q99LC2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.52■□□□□ 0.4
Cstf1Q99LC2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cstf1Q99LC2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cstf1Q99LC2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.52■□□□□ 0.4
Cstf1Q99LC2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cstf1Q99LC2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cstf1Q99LC2 Gm17808-201ENSMUST00000200859 894 ntBASIC17.52■□□□□ 0.4
Cstf1Q99LC2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cstf1Q99LC2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cstf1Q99LC2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cstf1Q99LC2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cstf1Q99LC2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cstf1Q99LC2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cstf1Q99LC2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cstf1Q99LC2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Cstf1Q99LC2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Cstf1Q99LC2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.52■□□□□ 0.39
Cstf1Q99LC2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cstf1Q99LC2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cstf1Q99LC2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cstf1Q99LC2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.51■□□□□ 0.39
Cstf1Q99LC2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cstf1Q99LC2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cstf1Q99LC2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cstf1Q99LC2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.51■□□□□ 0.39
Cstf1Q99LC2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cstf1Q99LC2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cstf1Q99LC2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cstf1Q99LC2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cstf1Q99LC2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cstf1Q99LC2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Gm7791-201ENSMUST00000219066 539 ntBASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cstf1Q99LC2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.49■□□□□ 0.39
Cstf1Q99LC2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cstf1Q99LC2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cstf1Q99LC2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Cstf1Q99LC2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cstf1Q99LC2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cstf1Q99LC2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cstf1Q99LC2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cstf1Q99LC2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cstf1Q99LC2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cstf1Q99LC2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cstf1Q99LC2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cstf1Q99LC2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Gm7638-201ENSMUST00000121348 967 ntBASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Gm5867-201ENSMUST00000063197 592 ntBASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cstf1Q99LC2 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms