Protein–RNA interactions for Protein: Q99KR6

Rnf34, E3 ubiquitin-protein ligase RNF34, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf34Q99KR6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf34Q99KR6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf34Q99KR6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Gm10493-201ENSMUST00000097270 612 ntBASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf34Q99KR6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.88■□□□□ 0.61
Rnf34Q99KR6 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.88■□□□□ 0.61
Rnf34Q99KR6 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.88■□□□□ 0.61
Rnf34Q99KR6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf34Q99KR6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rnf34Q99KR6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf34Q99KR6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.87■□□□□ 0.61
Rnf34Q99KR6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf34Q99KR6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf34Q99KR6 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.87■□□□□ 0.61
Rnf34Q99KR6 Gm7514-201ENSMUST00000209475 934 ntBASIC18.87■□□□□ 0.61
Rnf34Q99KR6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf34Q99KR6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf34Q99KR6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rnf34Q99KR6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf34Q99KR6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.87■□□□□ 0.61
Rnf34Q99KR6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.86■□□□□ 0.61
Rnf34Q99KR6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Rnf34Q99KR6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms