Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Gm27704-201ENSMUST00000185094 107 ntBASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd2Q99JR8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd2Q99JR8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd2Q99JR8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Smarcd2Q99JR8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd2Q99JR8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Smarcd2Q99JR8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.77■□□□□ 0.44
Smarcd2Q99JR8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd2Q99JR8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd2Q99JR8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd2Q99JR8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd2Q99JR8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcd2Q99JR8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
Smarcd2Q99JR8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcd2Q99JR8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Gm29518-201ENSMUST00000190858 372 ntBASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd2Q99JR8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd2Q99JR8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Smarcd2Q99JR8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd2Q99JR8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd2Q99JR8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd2Q99JR8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Smarcd2Q99JR8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd2Q99JR8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd2Q99JR8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Smarcd2Q99JR8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 Gm11355-201ENSMUST00000121120 306 ntBASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd2Q99JR8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd2Q99JR8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms