Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Col20a1Q923P0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Col20a1Q923P0 Mir5130-201ENSMUST00000175160 84 ntBASIC20.78■□□□□ 0.92
Col20a1Q923P0 Gm9731-201ENSMUST00000209480 747 ntBASIC20.78■□□□□ 0.92
Col20a1Q923P0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col20a1Q923P0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col20a1Q923P0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col20a1Q923P0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col20a1Q923P0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col20a1Q923P0 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.77■□□□□ 0.92
Col20a1Q923P0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col20a1Q923P0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col20a1Q923P0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Col20a1Q923P0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col20a1Q923P0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Col20a1Q923P0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col20a1Q923P0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col20a1Q923P0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.77■□□□□ 0.91
Col20a1Q923P0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.77■□□□□ 0.91
Col20a1Q923P0 Gm18032-201ENSMUST00000222541 538 ntBASIC20.77■□□□□ 0.91
Col20a1Q923P0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col20a1Q923P0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col20a1Q923P0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col20a1Q923P0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col20a1Q923P0 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.75■□□□□ 0.91
Col20a1Q923P0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Col20a1Q923P0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.75■□□□□ 0.91
Col20a1Q923P0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Col20a1Q923P0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col20a1Q923P0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col20a1Q923P0 Gm16061-201ENSMUST00000122167 857 ntBASIC20.75■□□□□ 0.91
Col20a1Q923P0 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.75■□□□□ 0.91
Col20a1Q923P0 Mir8112-201ENSMUST00000184382 131 ntBASIC20.75■□□□□ 0.91
Col20a1Q923P0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Col20a1Q923P0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.75■□□□□ 0.91
Col20a1Q923P0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col20a1Q923P0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col20a1Q923P0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Col20a1Q923P0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col20a1Q923P0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col20a1Q923P0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Col20a1Q923P0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.74■□□□□ 0.91
Col20a1Q923P0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col20a1Q923P0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col20a1Q923P0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col20a1Q923P0 Il3ra-202ENSMUST00000223589 738 ntBASIC20.74■□□□□ 0.91
Col20a1Q923P0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Col20a1Q923P0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
Col20a1Q923P0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col20a1Q923P0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col20a1Q923P0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Col20a1Q923P0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Col20a1Q923P0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col20a1Q923P0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col20a1Q923P0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col20a1Q923P0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col20a1Q923P0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col20a1Q923P0 Gm10013-201ENSMUST00000106074 672 ntBASIC20.73■□□□□ 0.91
Col20a1Q923P0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col20a1Q923P0 Gm6659-201ENSMUST00000174752 547 ntBASIC20.73■□□□□ 0.91
Col20a1Q923P0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.73■□□□□ 0.91
Col20a1Q923P0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col20a1Q923P0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col20a1Q923P0 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.73■□□□□ 0.91
Col20a1Q923P0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col20a1Q923P0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col20a1Q923P0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col20a1Q923P0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col20a1Q923P0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col20a1Q923P0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col20a1Q923P0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col20a1Q923P0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col20a1Q923P0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col20a1Q923P0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col20a1Q923P0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.72■□□□□ 0.91
Col20a1Q923P0 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.72■□□□□ 0.91
Col20a1Q923P0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col20a1Q923P0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.72■□□□□ 0.91
Col20a1Q923P0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col20a1Q923P0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col20a1Q923P0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col20a1Q923P0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col20a1Q923P0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col20a1Q923P0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col20a1Q923P0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms