Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.24■□□□□ 0.99
Sf3b3Q921M3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3b3Q921M3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.24■□□□□ 0.99
Sf3b3Q921M3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3b3Q921M3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3b3Q921M3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sf3b3Q921M3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3b3Q921M3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3b3Q921M3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3b3Q921M3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3b3Q921M3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3b3Q921M3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3b3Q921M3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3b3Q921M3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3b3Q921M3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3b3Q921M3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3b3Q921M3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21.22■□□□□ 0.99
Sf3b3Q921M3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3b3Q921M3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Sf3b3Q921M3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Sf3b3Q921M3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3b3Q921M3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sf3b3Q921M3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3b3Q921M3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3b3Q921M3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3b3Q921M3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.22■□□□□ 0.99
Sf3b3Q921M3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3b3Q921M3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Sf3b3Q921M3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3b3Q921M3 Gm11355-201ENSMUST00000121120 306 ntBASIC21.21■□□□□ 0.99
Sf3b3Q921M3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21.21■□□□□ 0.99
Sf3b3Q921M3 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.21■□□□□ 0.99
Sf3b3Q921M3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3b3Q921M3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3b3Q921M3 Gm10566-201ENSMUST00000086739 996 ntBASIC21.21■□□□□ 0.99
Sf3b3Q921M3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Sf3b3Q921M3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3b3Q921M3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3b3Q921M3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3b3Q921M3 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.2■□□□□ 0.98
Sf3b3Q921M3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.2■□□□□ 0.98
Sf3b3Q921M3 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.2■□□□□ 0.98
Sf3b3Q921M3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3b3Q921M3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Sf3b3Q921M3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3b3Q921M3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.2■□□□□ 0.98
Sf3b3Q921M3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3b3Q921M3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3b3Q921M3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Sf3b3Q921M3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3b3Q921M3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Gm26039-201ENSMUST00000158152 144 ntBASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3b3Q921M3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3b3Q921M3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3b3Q921M3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Sf3b3Q921M3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.18■□□□□ 0.98
Sf3b3Q921M3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3b3Q921M3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3b3Q921M3 Gm17808-201ENSMUST00000200859 894 ntBASIC21.18■□□□□ 0.98
Sf3b3Q921M3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.18■□□□□ 0.98
Sf3b3Q921M3 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.18■□□□□ 0.98
Sf3b3Q921M3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3b3Q921M3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3b3Q921M3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.18■□□□□ 0.98
Sf3b3Q921M3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3b3Q921M3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sf3b3Q921M3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3b3Q921M3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3b3Q921M3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms