Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha9Q91Y11 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdha9Q91Y11 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.71■□□□□ 0.58
Pcdha9Q91Y11 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdha9Q91Y11 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha9Q91Y11 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha9Q91Y11 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha9Q91Y11 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha9Q91Y11 Gm10517-202ENSMUST00000192970 758 ntBASIC18.7■□□□□ 0.58
Pcdha9Q91Y11 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.7■□□□□ 0.58
Pcdha9Q91Y11 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha9Q91Y11 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdha9Q91Y11 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha9Q91Y11 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha9Q91Y11 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha9Q91Y11 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha9Q91Y11 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pcdha9Q91Y11 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Mir1199-201ENSMUST00000117015 119 ntBASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha9Q91Y11 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.67■□□□□ 0.58
Pcdha9Q91Y11 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha9Q91Y11 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
Pcdha9Q91Y11 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha9Q91Y11 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha9Q91Y11 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha9Q91Y11 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha9Q91Y11 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha9Q91Y11 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha9Q91Y11 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdha9Q91Y11 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdha9Q91Y11 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha9Q91Y11 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha9Q91Y11 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha9Q91Y11 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha9Q91Y11 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms