Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 Gm5643-201ENSMUST00000117081 966 ntBASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 Gm42545-201ENSMUST00000202755 922 ntBASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb6Q91XZ4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Pcdhb6Q91XZ4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb6Q91XZ4 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.08■□□□□ 0.49
Pcdhb6Q91XZ4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdhb6Q91XZ4 Gm37292-201ENSMUST00000192062 758 ntBASIC18.08■□□□□ 0.48
Pcdhb6Q91XZ4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb6Q91XZ4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb6Q91XZ4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb6Q91XZ4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb6Q91XZ4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb6Q91XZ4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb6Q91XZ4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Gm10653-202ENSMUST00000139570 835 ntBASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb6Q91XZ4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms