Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Mtag2-201ENSMUST00000058665 714 ntBASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb8Q91XZ2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Mir2861-201ENSMUST00000175539 82 ntBASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Gm29791-202ENSMUST00000207888 369 ntBASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb8Q91XZ2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Dio3-201ENSMUST00000097228 1449 ntBASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.15■□□□□ 0.34
Pcdhb8Q91XZ2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhb8Q91XZ2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhb8Q91XZ2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb8Q91XZ2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb8Q91XZ2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb8Q91XZ2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb8Q91XZ2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb8Q91XZ2 Gm12896-201ENSMUST00000118430 226 ntBASIC17.14■□□□□ 0.33
Pcdhb8Q91XZ2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb8Q91XZ2 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.14■□□□□ 0.33
Pcdhb8Q91XZ2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb8Q91XZ2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb8Q91XZ2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Pcdhb8Q91XZ2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb8Q91XZ2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb8Q91XZ2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb8Q91XZ2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb8Q91XZ2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb8Q91XZ2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb8Q91XZ2 Gm10418-201ENSMUST00000100943 576 ntBASIC17.13■□□□□ 0.33
Pcdhb8Q91XZ2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb8Q91XZ2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb8Q91XZ2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms