Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga4Q91XY4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga4Q91XY4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga4Q91XY4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga4Q91XY4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga4Q91XY4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga4Q91XY4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga4Q91XY4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhga4Q91XY4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Pcdhga4Q91XY4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga4Q91XY4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga4Q91XY4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhga4Q91XY4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhga4Q91XY4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhga4Q91XY4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdhga4Q91XY4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.27■□□□□ 0.36
Pcdhga4Q91XY4 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.27■□□□□ 0.36
Pcdhga4Q91XY4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga4Q91XY4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga4Q91XY4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga4Q91XY4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga4Q91XY4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga4Q91XY4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga4Q91XY4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga4Q91XY4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga4Q91XY4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga4Q91XY4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga4Q91XY4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga4Q91XY4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga4Q91XY4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga4Q91XY4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdhga4Q91XY4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga4Q91XY4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhga4Q91XY4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga4Q91XY4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhga4Q91XY4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga4Q91XY4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga4Q91XY4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdhga4Q91XY4 Mir6349-201ENSMUST00000184059 97 ntBASIC17.25■□□□□ 0.35
Pcdhga4Q91XY4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga4Q91XY4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga4Q91XY4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga4Q91XY4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga4Q91XY4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhga4Q91XY4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Pcdhga4Q91XY4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdhga4Q91XY4 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.24■□□□□ 0.35
Pcdhga4Q91XY4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms