Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga9Q91XX9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga9Q91XX9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga9Q91XX9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga9Q91XX9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga9Q91XX9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga9Q91XX9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga9Q91XX9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga9Q91XX9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pcdhga9Q91XX9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhga9Q91XX9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga9Q91XX9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhga9Q91XX9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Pcdhga9Q91XX9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhga9Q91XX9 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.39■□□□□ 0.38
Pcdhga9Q91XX9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhga9Q91XX9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhga9Q91XX9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Pcdhga9Q91XX9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Gm11643-201ENSMUST00000119578 864 ntBASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga9Q91XX9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga9Q91XX9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Mir1199-201ENSMUST00000117015 119 ntBASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Gm18025-201ENSMUST00000221733 862 ntBASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga9Q91XX9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms