Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb1Q91XX8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb1Q91XX8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb1Q91XX8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb1Q91XX8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgb1Q91XX8 Odf3b-204ENSMUST00000227834 930 ntBASIC18.26■□□□□ 0.51
Pcdhgb1Q91XX8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb1Q91XX8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb1Q91XX8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb1Q91XX8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb1Q91XX8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb1Q91XX8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb1Q91XX8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgb1Q91XX8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb1Q91XX8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Gm7977-201ENSMUST00000193787 748 ntBASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb1Q91XX8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Gm11643-201ENSMUST00000119578 864 ntBASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Gm11539-201ENSMUST00000119837 557 ntBASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Gm13436-201ENSMUST00000120418 567 ntBASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhgb1Q91XX8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Gm6433-201ENSMUST00000118634 875 ntBASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhgb1Q91XX8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb1Q91XX8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhgb1Q91XX8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb1Q91XX8 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.21■□□□□ 0.51
Pcdhgb1Q91XX8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb1Q91XX8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb1Q91XX8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdhgb1Q91XX8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms