Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgc3Q91XX1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgc3Q91XX1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdhgc3Q91XX1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgc3Q91XX1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgc3Q91XX1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgc3Q91XX1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgc3Q91XX1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgc3Q91XX1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgc3Q91XX1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgc3Q91XX1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgc3Q91XX1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhgc3Q91XX1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Gm40848-201ENSMUST00000221998 324 ntBASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgc3Q91XX1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhgc3Q91XX1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgc3Q91XX1 Dancr-204ENSMUST00000132389 2347 ntBASIC16.58■□□□□ 0.25
Pcdhgc3Q91XX1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhgc3Q91XX1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgc3Q91XX1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgc3Q91XX1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Gm13216-201ENSMUST00000117145 591 ntBASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhgc3Q91XX1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgc3Q91XX1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.57■□□□□ 0.24
Pcdhgc3Q91XX1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms