Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx41Q91VN6 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.15■□□□□ 0.82
Ddx41Q91VN6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx41Q91VN6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx41Q91VN6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx41Q91VN6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx41Q91VN6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx41Q91VN6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.14■□□□□ 0.81
Ddx41Q91VN6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx41Q91VN6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx41Q91VN6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx41Q91VN6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Ddx41Q91VN6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx41Q91VN6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx41Q91VN6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx41Q91VN6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx41Q91VN6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Gm37292-201ENSMUST00000192062 758 ntBASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Gm7977-201ENSMUST00000193787 748 ntBASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx41Q91VN6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.12■□□□□ 0.81
Ddx41Q91VN6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx41Q91VN6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx41Q91VN6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Mir6349-201ENSMUST00000184059 97 ntBASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx41Q91VN6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx41Q91VN6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx41Q91VN6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx41Q91VN6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx41Q91VN6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx41Q91VN6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ddx41Q91VN6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ddx41Q91VN6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Ddx41Q91VN6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx41Q91VN6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.1■□□□□ 0.81
Ddx41Q91VN6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx41Q91VN6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx41Q91VN6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx41Q91VN6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.09■□□□□ 0.81
Ddx41Q91VN6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx41Q91VN6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ddx41Q91VN6 Gm5417-201ENSMUST00000079706 384 ntBASIC20.09■□□□□ 0.81
Ddx41Q91VN6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx41Q91VN6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx41Q91VN6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Ddx41Q91VN6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ddx41Q91VN6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx41Q91VN6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms