Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.49■□□□□ 0.55
Snx9Q91VH2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Snx9Q91VH2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Gm13401-201ENSMUST00000117074 291 ntBASIC18.48■□□□□ 0.55
Snx9Q91VH2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.48■□□□□ 0.55
Snx9Q91VH2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Snx9Q91VH2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.48■□□□□ 0.55
Snx9Q91VH2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Snx9Q91VH2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Snx9Q91VH2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Snx9Q91VH2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Snx9Q91VH2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Snx9Q91VH2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Snx9Q91VH2 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.47■□□□□ 0.55
Snx9Q91VH2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.47■□□□□ 0.55
Snx9Q91VH2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Snx9Q91VH2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Snx9Q91VH2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Snx9Q91VH2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Snx9Q91VH2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.47■□□□□ 0.55
Snx9Q91VH2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Snx9Q91VH2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Snx9Q91VH2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snx9Q91VH2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snx9Q91VH2 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.46■□□□□ 0.55
Snx9Q91VH2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snx9Q91VH2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snx9Q91VH2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snx9Q91VH2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.46■□□□□ 0.55
Snx9Q91VH2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snx9Q91VH2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.46■□□□□ 0.55
Snx9Q91VH2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snx9Q91VH2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Snx9Q91VH2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snx9Q91VH2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snx9Q91VH2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snx9Q91VH2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snx9Q91VH2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snx9Q91VH2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snx9Q91VH2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Snx9Q91VH2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Snx9Q91VH2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Snx9Q91VH2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.45■□□□□ 0.54
Snx9Q91VH2 Timm23-208ENSMUST00000226683 750 ntBASIC18.45■□□□□ 0.54
Snx9Q91VH2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.45■□□□□ 0.54
Snx9Q91VH2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snx9Q91VH2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snx9Q91VH2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snx9Q91VH2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.44■□□□□ 0.54
Snx9Q91VH2 Gm4974-201ENSMUST00000209974 875 ntBASIC18.44■□□□□ 0.54
Snx9Q91VH2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Gm5417-201ENSMUST00000079706 384 ntBASIC18.44■□□□□ 0.54
Snx9Q91VH2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms