Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 Gm15378-201ENSMUST00000121894 207 ntBASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb11Q91UZ8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb11Q91UZ8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb11Q91UZ8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb11Q91UZ8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb11Q91UZ8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb11Q91UZ8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb11Q91UZ8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb11Q91UZ8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb11Q91UZ8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Pcdhb11Q91UZ8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb11Q91UZ8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb11Q91UZ8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb11Q91UZ8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhb11Q91UZ8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb11Q91UZ8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhb11Q91UZ8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.02■□□□□ 0.47
Pcdhb11Q91UZ8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Gm22240-201ENSMUST00000175225 82 ntBASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Gm43183-201ENSMUST00000200632 547 ntBASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb11Q91UZ8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb11Q91UZ8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb11Q91UZ8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18■□□□□ 0.47
Pcdhb11Q91UZ8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Pcdhb11Q91UZ8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhb11Q91UZ8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb11Q91UZ8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Pcdhb11Q91UZ8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb11Q91UZ8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb11Q91UZ8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb11Q91UZ8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb11Q91UZ8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb11Q91UZ8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhb11Q91UZ8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdhb11Q91UZ8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb11Q91UZ8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb11Q91UZ8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb11Q91UZ8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb11Q91UZ8 Gm6576-201ENSMUST00000169678 883 ntBASIC17.99■□□□□ 0.47
Pcdhb11Q91UZ8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb11Q91UZ8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb11Q91UZ8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb11Q91UZ8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb11Q91UZ8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb11Q91UZ8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb11Q91UZ8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb11Q91UZ8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb11Q91UZ8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb11Q91UZ8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb11Q91UZ8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms