Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H1fooQ8VIK3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H1fooQ8VIK3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H1fooQ8VIK3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.71□□□□□ -0.06
H1fooQ8VIK3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
H1fooQ8VIK3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Gm11927-201ENSMUST00000118472 759 ntBASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Gm2559-201ENSMUST00000201323 363 ntBASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms