Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.72■□□□□ 0.11
Odf4Q8VI88 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Odf4Q8VI88 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Odf4Q8VI88 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Odf4Q8VI88 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Gm27275-201ENSMUST00000184318 272 ntBASIC15.71■□□□□ 0.11
Odf4Q8VI88 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Odf4Q8VI88 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Odf4Q8VI88 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Odf4Q8VI88 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Odf4Q8VI88 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Odf4Q8VI88 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Odf4Q8VI88 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Odf4Q8VI88 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Odf4Q8VI88 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Odf4Q8VI88 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Odf4Q8VI88 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Odf4Q8VI88 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.69■□□□□ 0.1
Odf4Q8VI88 Gm2559-201ENSMUST00000201323 363 ntBASIC15.69■□□□□ 0.1
Odf4Q8VI88 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.69■□□□□ 0.1
Odf4Q8VI88 Gm10252-201ENSMUST00000209541 832 ntBASIC15.69■□□□□ 0.1
Odf4Q8VI88 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Odf4Q8VI88 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Odf4Q8VI88 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Odf4Q8VI88 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.69■□□□□ 0.1
Odf4Q8VI88 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Odf4Q8VI88 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Odf4Q8VI88 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Odf4Q8VI88 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Odf4Q8VI88 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.69■□□□□ 0.1
Odf4Q8VI88 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Odf4Q8VI88 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Odf4Q8VI88 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Odf4Q8VI88 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.68■□□□□ 0.1
Odf4Q8VI88 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.68■□□□□ 0.1
Odf4Q8VI88 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.68■□□□□ 0.1
Odf4Q8VI88 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms