Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.71■□□□□ 0.59
Lmcd1Q8VEE1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Lmcd1Q8VEE1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lmcd1Q8VEE1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lmcd1Q8VEE1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lmcd1Q8VEE1 Gm12895-201ENSMUST00000122214 226 ntBASIC18.7■□□□□ 0.58
Lmcd1Q8VEE1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lmcd1Q8VEE1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Lmcd1Q8VEE1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.7■□□□□ 0.58
Lmcd1Q8VEE1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lmcd1Q8VEE1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lmcd1Q8VEE1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Lmcd1Q8VEE1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.7■□□□□ 0.58
Lmcd1Q8VEE1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lmcd1Q8VEE1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Lmcd1Q8VEE1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lmcd1Q8VEE1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 Gm15794-201ENSMUST00000120182 631 ntBASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 Actl10-202ENSMUST00000226583 1501 ntBASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lmcd1Q8VEE1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Gm11452-201ENSMUST00000122376 690 ntBASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Gm10052-201ENSMUST00000168019 960 ntBASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Gm7729-201ENSMUST00000050143 801 ntBASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lmcd1Q8VEE1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms