Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx39aQ8VDW0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.55■□□□□ 0.72
Ddx39aQ8VDW0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.55■□□□□ 0.72
Ddx39aQ8VDW0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx39aQ8VDW0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx39aQ8VDW0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx39aQ8VDW0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx39aQ8VDW0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx39aQ8VDW0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.54■□□□□ 0.72
Ddx39aQ8VDW0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ddx39aQ8VDW0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx39aQ8VDW0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ddx39aQ8VDW0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx39aQ8VDW0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Ddx39aQ8VDW0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx39aQ8VDW0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx39aQ8VDW0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Ddx39aQ8VDW0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx39aQ8VDW0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ddx39aQ8VDW0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx39aQ8VDW0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.51■□□□□ 0.71
Ddx39aQ8VDW0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx39aQ8VDW0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx39aQ8VDW0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx39aQ8VDW0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx39aQ8VDW0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Gm24841-201ENSMUST00000158676 357 ntBASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms