Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc1Q8VCB1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc1Q8VCB1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ndc1Q8VCB1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ndc1Q8VCB1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ndc1Q8VCB1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ndc1Q8VCB1 Mir2861-201ENSMUST00000175539 82 ntBASIC16.58■□□□□ 0.24
Ndc1Q8VCB1 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.58■□□□□ 0.24
Ndc1Q8VCB1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.58■□□□□ 0.24
Ndc1Q8VCB1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ndc1Q8VCB1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ndc1Q8VCB1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ndc1Q8VCB1 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.58■□□□□ 0.24
Ndc1Q8VCB1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ndc1Q8VCB1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ndc1Q8VCB1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ndc1Q8VCB1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ndc1Q8VCB1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ndc1Q8VCB1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ndc1Q8VCB1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ndc1Q8VCB1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ndc1Q8VCB1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ndc1Q8VCB1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ndc1Q8VCB1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ndc1Q8VCB1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ndc1Q8VCB1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.56■□□□□ 0.24
Ndc1Q8VCB1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms