Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.95■□□□□ 0.3
Rnf8Q8VC56 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.95■□□□□ 0.3
Rnf8Q8VC56 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf8Q8VC56 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.95■□□□□ 0.3
Rnf8Q8VC56 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf8Q8VC56 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf8Q8VC56 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf8Q8VC56 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf8Q8VC56 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rnf8Q8VC56 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf8Q8VC56 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf8Q8VC56 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.95■□□□□ 0.3
Rnf8Q8VC56 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf8Q8VC56 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Gm4968-201ENSMUST00000071458 858 ntBASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf8Q8VC56 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf8Q8VC56 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf8Q8VC56 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf8Q8VC56 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf8Q8VC56 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf8Q8VC56 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf8Q8VC56 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf8Q8VC56 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Rnf8Q8VC56 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.93■□□□□ 0.3
Rnf8Q8VC56 Gm26524-201ENSMUST00000192339 390 ntBASIC16.93■□□□□ 0.3
Rnf8Q8VC56 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf8Q8VC56 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rnf8Q8VC56 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf8Q8VC56 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf8Q8VC56 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Rab3c-203ENSMUST00000224180 967 ntBASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf8Q8VC56 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf8Q8VC56 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf8Q8VC56 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.91■□□□□ 0.3
Rnf8Q8VC56 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rnf8Q8VC56 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf8Q8VC56 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rnf8Q8VC56 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf8Q8VC56 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf8Q8VC56 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.91■□□□□ 0.3
Rnf8Q8VC56 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf8Q8VC56 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf8Q8VC56 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Rnf8Q8VC56 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.91■□□□□ 0.3
Rnf8Q8VC56 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf8Q8VC56 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf8Q8VC56 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf8Q8VC56 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.9■□□□□ 0.3
Rnf8Q8VC56 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms