Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Cdt1Q8R4E9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdt1Q8R4E9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdt1Q8R4E9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cdt1Q8R4E9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Cdt1Q8R4E9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cdt1Q8R4E9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdt1Q8R4E9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdt1Q8R4E9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdt1Q8R4E9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Cdt1Q8R4E9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdt1Q8R4E9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cdt1Q8R4E9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdt1Q8R4E9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdt1Q8R4E9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17■□□□□ 0.31
Cdt1Q8R4E9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17■□□□□ 0.31
Cdt1Q8R4E9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdt1Q8R4E9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cdt1Q8R4E9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdt1Q8R4E9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdt1Q8R4E9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cdt1Q8R4E9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cdt1Q8R4E9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdt1Q8R4E9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdt1Q8R4E9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdt1Q8R4E9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 Gm21362-201ENSMUST00000194272 928 ntBASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdt1Q8R4E9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Mtag2-201ENSMUST00000058665 714 ntBASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Gm10819-201ENSMUST00000099988 561 ntBASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdt1Q8R4E9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdt1Q8R4E9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdt1Q8R4E9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.96■□□□□ 0.31
Cdt1Q8R4E9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdt1Q8R4E9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms