Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim29Q8R2Q0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim29Q8R2Q0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim29Q8R2Q0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim29Q8R2Q0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim29Q8R2Q0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim29Q8R2Q0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim29Q8R2Q0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim29Q8R2Q0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim29Q8R2Q0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim29Q8R2Q0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim29Q8R2Q0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim29Q8R2Q0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim29Q8R2Q0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim29Q8R2Q0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim29Q8R2Q0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim29Q8R2Q0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim29Q8R2Q0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim29Q8R2Q0 Gm11249-201ENSMUST00000117071 859 ntBASIC20.1■□□□□ 0.81
Trim29Q8R2Q0 Mir2861-201ENSMUST00000175539 82 ntBASIC20.1■□□□□ 0.81
Trim29Q8R2Q0 Mir6349-201ENSMUST00000184059 97 ntBASIC20.1■□□□□ 0.81
Trim29Q8R2Q0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.1■□□□□ 0.81
Trim29Q8R2Q0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.1■□□□□ 0.81
Trim29Q8R2Q0 Gm20049-201ENSMUST00000219950 730 ntBASIC20.1■□□□□ 0.81
Trim29Q8R2Q0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim29Q8R2Q0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim29Q8R2Q0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim29Q8R2Q0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim29Q8R2Q0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Trim29Q8R2Q0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim29Q8R2Q0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim29Q8R2Q0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Trim29Q8R2Q0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trim29Q8R2Q0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trim29Q8R2Q0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.08■□□□□ 0.81
Trim29Q8R2Q0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Trim29Q8R2Q0 Gm13158-201ENSMUST00000122007 736 ntBASIC20.08■□□□□ 0.81
Trim29Q8R2Q0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.08■□□□□ 0.81
Trim29Q8R2Q0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim29Q8R2Q0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim29Q8R2Q0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim29Q8R2Q0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim29Q8R2Q0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
Trim29Q8R2Q0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.08■□□□□ 0.8
Trim29Q8R2Q0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim29Q8R2Q0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim29Q8R2Q0 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 Gm15375-201ENSMUST00000119510 849 ntBASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim29Q8R2Q0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 Gm27275-201ENSMUST00000184318 272 ntBASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim29Q8R2Q0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim29Q8R2Q0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim29Q8R2Q0 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.05■□□□□ 0.8
Trim29Q8R2Q0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim29Q8R2Q0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim29Q8R2Q0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim29Q8R2Q0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim29Q8R2Q0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms