Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Atf7Q8R0S1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atf7Q8R0S1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atf7Q8R0S1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atf7Q8R0S1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Atf7Q8R0S1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.77■□□□□ 0.92
Atf7Q8R0S1 Gm18666-201ENSMUST00000190039 958 ntBASIC20.77■□□□□ 0.92
Atf7Q8R0S1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.77■□□□□ 0.92
Atf7Q8R0S1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atf7Q8R0S1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Atf7Q8R0S1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atf7Q8R0S1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Atf7Q8R0S1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atf7Q8R0S1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Atf7Q8R0S1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atf7Q8R0S1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atf7Q8R0S1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.77■□□□□ 0.91
Atf7Q8R0S1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Gm6576-201ENSMUST00000169678 883 ntBASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf7Q8R0S1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atf7Q8R0S1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atf7Q8R0S1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atf7Q8R0S1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Atf7Q8R0S1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atf7Q8R0S1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.75■□□□□ 0.91
Atf7Q8R0S1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Atf7Q8R0S1 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.75■□□□□ 0.91
Atf7Q8R0S1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atf7Q8R0S1 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.75■□□□□ 0.91
Atf7Q8R0S1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atf7Q8R0S1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.75■□□□□ 0.91
Atf7Q8R0S1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Atf7Q8R0S1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Atf7Q8R0S1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.74■□□□□ 0.91
Atf7Q8R0S1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Gm42545-201ENSMUST00000202755 922 ntBASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Atf7Q8R0S1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atf7Q8R0S1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Atf7Q8R0S1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atf7Q8R0S1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Atf7Q8R0S1 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.73■□□□□ 0.91
Atf7Q8R0S1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atf7Q8R0S1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atf7Q8R0S1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atf7Q8R0S1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Atf7Q8R0S1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atf7Q8R0S1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Atf7Q8R0S1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atf7Q8R0S1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Atf7Q8R0S1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Atf7Q8R0S1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Atf7Q8R0S1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Atf7Q8R0S1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.72■□□□□ 0.91
Atf7Q8R0S1 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.72■□□□□ 0.91
Atf7Q8R0S1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Atf7Q8R0S1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atf7Q8R0S1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atf7Q8R0S1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Atf7Q8R0S1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf7Q8R0S1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf7Q8R0S1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.71■□□□□ 0.91
Atf7Q8R0S1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf7Q8R0S1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf7Q8R0S1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf7Q8R0S1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Atf7Q8R0S1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.71■□□□□ 0.91
Atf7Q8R0S1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms