Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf4Q8K4J2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf4Q8K4J2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.06■□□□□ 0.16
Ebf4Q8K4J2 Smad6-203ENSMUST00000179458 273 ntBASIC16.06■□□□□ 0.16
Ebf4Q8K4J2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Ebf4Q8K4J2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf4Q8K4J2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf4Q8K4J2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf4Q8K4J2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf4Q8K4J2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf4Q8K4J2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf4Q8K4J2 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.06■□□□□ 0.16
Ebf4Q8K4J2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf4Q8K4J2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf4Q8K4J2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 Gm43137-201ENSMUST00000198052 594 ntBASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.03■□□□□ 0.16
Ebf4Q8K4J2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ebf4Q8K4J2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ebf4Q8K4J2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ebf4Q8K4J2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.02■□□□□ 0.16
Ebf4Q8K4J2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ebf4Q8K4J2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ebf4Q8K4J2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ebf4Q8K4J2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.02■□□□□ 0.16
Ebf4Q8K4J2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.02■□□□□ 0.16
Ebf4Q8K4J2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf4Q8K4J2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf4Q8K4J2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Ebf4Q8K4J2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf4Q8K4J2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf4Q8K4J2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf4Q8K4J2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf4Q8K4J2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf4Q8K4J2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf4Q8K4J2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf4Q8K4J2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf4Q8K4J2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf4Q8K4J2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.01■□□□□ 0.15
Ebf4Q8K4J2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf4Q8K4J2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms