Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC21.41■■□□□ 1.02
Col23a1Q8K4G2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC21.41■■□□□ 1.02
Col23a1Q8K4G2 Vti1a-206ENSMUST00000225529 1244 ntBASIC21.41■■□□□ 1.02
Col23a1Q8K4G2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Col23a1Q8K4G2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Col23a1Q8K4G2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Col23a1Q8K4G2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col23a1Q8K4G2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col23a1Q8K4G2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Col23a1Q8K4G2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col23a1Q8K4G2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC21.4■■□□□ 1.02
Col23a1Q8K4G2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Col23a1Q8K4G2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col23a1Q8K4G2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col23a1Q8K4G2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Col23a1Q8K4G2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Col23a1Q8K4G2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Col23a1Q8K4G2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Col23a1Q8K4G2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Col23a1Q8K4G2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col23a1Q8K4G2 Gm1401-201ENSMUST00000122048 772 ntBASIC21.39■■□□□ 1.01
Col23a1Q8K4G2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col23a1Q8K4G2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col23a1Q8K4G2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col23a1Q8K4G2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC21.39■■□□□ 1.01
Col23a1Q8K4G2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC21.39■■□□□ 1.01
Col23a1Q8K4G2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col23a1Q8K4G2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col23a1Q8K4G2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col23a1Q8K4G2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col23a1Q8K4G2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col23a1Q8K4G2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col23a1Q8K4G2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.39■■□□□ 1.01
Col23a1Q8K4G2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col23a1Q8K4G2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Col23a1Q8K4G2 Gm11594-201ENSMUST00000122313 162 ntBASIC21.38■■□□□ 1.01
Col23a1Q8K4G2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Col23a1Q8K4G2 AC161829.1-201ENSMUST00000220298 281 ntBASIC21.38■■□□□ 1.01
Col23a1Q8K4G2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Col23a1Q8K4G2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col23a1Q8K4G2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col23a1Q8K4G2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col23a1Q8K4G2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col23a1Q8K4G2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col23a1Q8K4G2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Col23a1Q8K4G2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col23a1Q8K4G2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col23a1Q8K4G2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Col23a1Q8K4G2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col23a1Q8K4G2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col23a1Q8K4G2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.37■■□□□ 1.01
Col23a1Q8K4G2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col23a1Q8K4G2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col23a1Q8K4G2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col23a1Q8K4G2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 Gm15372-201ENSMUST00000120729 834 ntBASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 AC138767.1-201ENSMUST00000222661 415 ntBASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col23a1Q8K4G2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col23a1Q8K4G2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Col23a1Q8K4G2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
Col23a1Q8K4G2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col23a1Q8K4G2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col23a1Q8K4G2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col23a1Q8K4G2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col23a1Q8K4G2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col23a1Q8K4G2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col23a1Q8K4G2 Tgds-204ENSMUST00000228543 1594 ntBASIC21.34■■□□□ 1.01
Col23a1Q8K4G2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col23a1Q8K4G2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col23a1Q8K4G2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col23a1Q8K4G2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms