Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.61■□□□□ 0.25
Clrn1Q8K445 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.61■□□□□ 0.25
Clrn1Q8K445 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn1Q8K445 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Mir6349-201ENSMUST00000184059 97 ntBASIC16.6■□□□□ 0.25
Clrn1Q8K445 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.6■□□□□ 0.25
Clrn1Q8K445 Gm18666-201ENSMUST00000190039 958 ntBASIC16.6■□□□□ 0.25
Clrn1Q8K445 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Clrn1Q8K445 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clrn1Q8K445 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clrn1Q8K445 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clrn1Q8K445 Gm29791-202ENSMUST00000207888 369 ntBASIC16.59■□□□□ 0.25
Clrn1Q8K445 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clrn1Q8K445 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.59■□□□□ 0.25
Clrn1Q8K445 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Clrn1Q8K445 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Clrn1Q8K445 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clrn1Q8K445 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.58■□□□□ 0.25
Clrn1Q8K445 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clrn1Q8K445 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clrn1Q8K445 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clrn1Q8K445 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clrn1Q8K445 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Gm10418-201ENSMUST00000100943 576 ntBASIC16.58■□□□□ 0.24
Clrn1Q8K445 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn1Q8K445 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.58■□□□□ 0.24
Clrn1Q8K445 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Clrn1Q8K445 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.57■□□□□ 0.24
Clrn1Q8K445 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Gm20760-201ENSMUST00000179197 648 ntBASIC16.57■□□□□ 0.24
Clrn1Q8K445 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms