Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm6Q8CIR4 Ank2-226ENSMUST00000189368 339 ntBASIC17.67■□□□□ 0.42
Trpm6Q8CIR4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.67■□□□□ 0.42
Trpm6Q8CIR4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trpm6Q8CIR4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trpm6Q8CIR4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm6Q8CIR4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm6Q8CIR4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm6Q8CIR4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Trpm6Q8CIR4 Idnk-204ENSMUST00000226010 1898 ntBASIC17.67■□□□□ 0.42
Trpm6Q8CIR4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.67■□□□□ 0.42
Trpm6Q8CIR4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trpm6Q8CIR4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm6Q8CIR4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm6Q8CIR4 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm6Q8CIR4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Gm18958-201ENSMUST00000174258 762 ntBASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm6Q8CIR4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trpm6Q8CIR4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Gm25016-201ENSMUST00000158399 131 ntBASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm6Q8CIR4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.63■□□□□ 0.41
Trpm6Q8CIR4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm6Q8CIR4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm6Q8CIR4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm6Q8CIR4 Gm7284-201ENSMUST00000131667 944 ntBASIC17.63■□□□□ 0.41
Trpm6Q8CIR4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm6Q8CIR4 Il3ra-202ENSMUST00000223589 738 ntBASIC17.63■□□□□ 0.41
Trpm6Q8CIR4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm6Q8CIR4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm6Q8CIR4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm6Q8CIR4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Trpm6Q8CIR4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm6Q8CIR4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm6Q8CIR4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm6Q8CIR4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm6Q8CIR4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm6Q8CIR4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.62■□□□□ 0.41
Trpm6Q8CIR4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trpm6Q8CIR4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Trpm6Q8CIR4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm6Q8CIR4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.62■□□□□ 0.41
Trpm6Q8CIR4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm6Q8CIR4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.62■□□□□ 0.41
Trpm6Q8CIR4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.62■□□□□ 0.41
Trpm6Q8CIR4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm6Q8CIR4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trpm6Q8CIR4 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.61■□□□□ 0.41
Trpm6Q8CIR4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.61■□□□□ 0.41
Trpm6Q8CIR4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm6Q8CIR4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms