Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1aQ8CIG0 Grk6-206ENSMUST00000224995 2971 ntBASIC19.86■□□□□ 0.77
Depdc1aQ8CIG0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1aQ8CIG0 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.86■□□□□ 0.77
Depdc1aQ8CIG0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1aQ8CIG0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1aQ8CIG0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.86■□□□□ 0.77
Depdc1aQ8CIG0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1aQ8CIG0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1aQ8CIG0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1aQ8CIG0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1aQ8CIG0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1aQ8CIG0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.86■□□□□ 0.77
Depdc1aQ8CIG0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Depdc1aQ8CIG0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.85■□□□□ 0.77
Depdc1aQ8CIG0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Depdc1aQ8CIG0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Depdc1aQ8CIG0 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.85■□□□□ 0.77
Depdc1aQ8CIG0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Depdc1aQ8CIG0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Gm18959-201ENSMUST00000208954 655 ntBASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1aQ8CIG0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Depdc1aQ8CIG0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Depdc1aQ8CIG0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.83■□□□□ 0.77
Depdc1aQ8CIG0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Depdc1aQ8CIG0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Depdc1aQ8CIG0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Depdc1aQ8CIG0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Depdc1aQ8CIG0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.83■□□□□ 0.76
Depdc1aQ8CIG0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Gm2274-201ENSMUST00000184539 609 ntBASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Gm37025-201ENSMUST00000195159 829 ntBASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Gm45058-201ENSMUST00000205810 766 ntBASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Gm9731-201ENSMUST00000209480 747 ntBASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Depdc1aQ8CIG0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Depdc1aQ8CIG0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Depdc1aQ8CIG0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Depdc1aQ8CIG0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Depdc1aQ8CIG0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Depdc1aQ8CIG0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Depdc1aQ8CIG0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.81■□□□□ 0.76
Depdc1aQ8CIG0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Depdc1aQ8CIG0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1aQ8CIG0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1aQ8CIG0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1aQ8CIG0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1aQ8CIG0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.8■□□□□ 0.76
Depdc1aQ8CIG0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Depdc1aQ8CIG0 Il3ra-202ENSMUST00000223589 738 ntBASIC19.8■□□□□ 0.76
Depdc1aQ8CIG0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1aQ8CIG0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1aQ8CIG0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1aQ8CIG0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1aQ8CIG0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms