Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm22325-201ENSMUST00000158904 308 ntBASIC17.71■□□□□ 0.43
Clip4Q8CI96 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clip4Q8CI96 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clip4Q8CI96 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clip4Q8CI96 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Clip4Q8CI96 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clip4Q8CI96 Dio3-201ENSMUST00000097228 1449 ntBASIC17.71■□□□□ 0.43
Clip4Q8CI96 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clip4Q8CI96 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.71■□□□□ 0.42
Clip4Q8CI96 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Clip4Q8CI96 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clip4Q8CI96 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clip4Q8CI96 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clip4Q8CI96 Gm27275-201ENSMUST00000184318 272 ntBASIC17.7■□□□□ 0.42
Clip4Q8CI96 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.7■□□□□ 0.42
Clip4Q8CI96 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clip4Q8CI96 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clip4Q8CI96 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.7■□□□□ 0.42
Clip4Q8CI96 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clip4Q8CI96 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Clip4Q8CI96 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clip4Q8CI96 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.69■□□□□ 0.42
Clip4Q8CI96 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Clip4Q8CI96 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clip4Q8CI96 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clip4Q8CI96 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clip4Q8CI96 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Clip4Q8CI96 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clip4Q8CI96 Gm8520-201ENSMUST00000186517 868 ntBASIC17.68■□□□□ 0.42
Clip4Q8CI96 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.68■□□□□ 0.42
Clip4Q8CI96 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clip4Q8CI96 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clip4Q8CI96 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clip4Q8CI96 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.68■□□□□ 0.42
Clip4Q8CI96 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clip4Q8CI96 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clip4Q8CI96 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Gm2399-201ENSMUST00000104944 225 ntBASIC17.67■□□□□ 0.42
Clip4Q8CI96 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clip4Q8CI96 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clip4Q8CI96 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clip4Q8CI96 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clip4Q8CI96 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clip4Q8CI96 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clip4Q8CI96 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clip4Q8CI96 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.66■□□□□ 0.42
Clip4Q8CI96 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.66■□□□□ 0.42
Clip4Q8CI96 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clip4Q8CI96 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.66■□□□□ 0.42
Clip4Q8CI96 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clip4Q8CI96 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Clip4Q8CI96 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clip4Q8CI96 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clip4Q8CI96 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Clip4Q8CI96 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clip4Q8CI96 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clip4Q8CI96 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clip4Q8CI96 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clip4Q8CI96 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clip4Q8CI96 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clip4Q8CI96 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clip4Q8CI96 Gm13168-201ENSMUST00000121771 632 ntBASIC17.65■□□□□ 0.42
Clip4Q8CI96 Gm22240-201ENSMUST00000175225 82 ntBASIC17.65■□□□□ 0.42
Clip4Q8CI96 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.65■□□□□ 0.42
Clip4Q8CI96 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clip4Q8CI96 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clip4Q8CI96 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms