Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh1Q8CGV4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh1Q8CGV4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.1■□□□□ 0.33
Rdh1Q8CGV4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh1Q8CGV4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh1Q8CGV4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh1Q8CGV4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh1Q8CGV4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh1Q8CGV4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rdh1Q8CGV4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh1Q8CGV4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh1Q8CGV4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh1Q8CGV4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh1Q8CGV4 Idnk-204ENSMUST00000226010 1898 ntBASIC17.1■□□□□ 0.33
Rdh1Q8CGV4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh1Q8CGV4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rdh1Q8CGV4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rdh1Q8CGV4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rdh1Q8CGV4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rdh1Q8CGV4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rdh1Q8CGV4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.08■□□□□ 0.32
Rdh1Q8CGV4 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.08■□□□□ 0.32
Rdh1Q8CGV4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rdh1Q8CGV4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rdh1Q8CGV4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.08■□□□□ 0.32
Rdh1Q8CGV4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rdh1Q8CGV4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rdh1Q8CGV4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh1Q8CGV4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh1Q8CGV4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh1Q8CGV4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh1Q8CGV4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh1Q8CGV4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.06■□□□□ 0.32
Rdh1Q8CGV4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Rdh1Q8CGV4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh1Q8CGV4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh1Q8CGV4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Rdh1Q8CGV4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh1Q8CGV4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh1Q8CGV4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms